STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI62876.1Nucleoside-diphosphate-sugar epimerases. (344 aa)    
Predicted Functional Partners:
ABI62877.1
hpnB protein.
 
    0.947
ABI62875.1
Hypothetical membrane spanning protein.
 
     0.893
ABI62878.1
Farnesyl-diphosphate farnesyltransferase.
 
 
 0.870
ABI62879.1
Phytoene synthase.
 
 
 0.868
ABI63005.1
Squalene--hopene cyclase.
 
 
 0.841
ABI62873.1
Acriflavin resistance plasma membrane protein.
 
     0.797
ABI63304.1
Molybdenum cofactor biosynthesis protein A.
 
     0.769
ABI61130.1
Hypothetical membrane spanning protein.
 
     0.766
ABI63305.1
S-adenosylhomocysteine nucleosidase.
 
     0.762
ABI63299.1
Radical SAM superfamily.
  
     0.747
Your Current Organism:
Granulibacter bethesdensis
NCBI taxonomy Id: 391165
Other names: G. bethesdensis CGDNIH1, Granulibacter bethesdensis CGDNIH1, Granulibacter bethesdensis str. CGDNIH1, Granulibacter bethesdensis strain CGDNIH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.