Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABI61090.1 | ureA | GbCGDNIH1_0192 | GbCGDNIH1_2162 | Phosphinothricin N-acetyltransferase. | Urease gamma subunit; Belongs to the urease gamma subunit family. | 0.487 |
ABI61090.1 | ureD | GbCGDNIH1_0192 | GbCGDNIH1_2161 | Phosphinothricin N-acetyltransferase. | Urease accessory protein ureD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.444 |
ABI62642.1 | ABI62643.1 | GbCGDNIH1_1744 | GbCGDNIH1_1745 | Allophanate hydrolase. | Urea carboxylase. | 0.999 |
ABI62642.1 | ureA | GbCGDNIH1_1744 | GbCGDNIH1_2162 | Allophanate hydrolase. | Urease gamma subunit; Belongs to the urease gamma subunit family. | 0.900 |
ABI62642.1 | ureB | GbCGDNIH1_1744 | GbCGDNIH1_2163 | Allophanate hydrolase. | Urease beta subunit; Belongs to the urease beta subunit family. | 0.900 |
ABI62642.1 | ureC | GbCGDNIH1_1744 | GbCGDNIH1_2164 | Allophanate hydrolase. | Urease alpha subunit. | 0.900 |
ABI62643.1 | ABI62642.1 | GbCGDNIH1_1745 | GbCGDNIH1_1744 | Urea carboxylase. | Allophanate hydrolase. | 0.999 |
ABI62643.1 | ureA | GbCGDNIH1_1745 | GbCGDNIH1_2162 | Urea carboxylase. | Urease gamma subunit; Belongs to the urease gamma subunit family. | 0.906 |
ABI62643.1 | ureB | GbCGDNIH1_1745 | GbCGDNIH1_2163 | Urea carboxylase. | Urease beta subunit; Belongs to the urease beta subunit family. | 0.931 |
ABI62643.1 | ureC | GbCGDNIH1_1745 | GbCGDNIH1_2164 | Urea carboxylase. | Urease alpha subunit. | 0.935 |
ABI63066.1 | ureA | GbCGDNIH1_2168 | GbCGDNIH1_2162 | Transcriptional regulator, AraC family. | Urease gamma subunit; Belongs to the urease gamma subunit family. | 0.441 |
ABI63066.1 | ureB | GbCGDNIH1_2168 | GbCGDNIH1_2163 | Transcriptional regulator, AraC family. | Urease beta subunit; Belongs to the urease beta subunit family. | 0.472 |
ABI63066.1 | ureC | GbCGDNIH1_2168 | GbCGDNIH1_2164 | Transcriptional regulator, AraC family. | Urease alpha subunit. | 0.504 |
ABI63066.1 | ureE | GbCGDNIH1_2168 | GbCGDNIH1_2165 | Transcriptional regulator, AraC family. | Urease accessory protein ureE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.552 |
ABI63066.1 | ureF | GbCGDNIH1_2168 | GbCGDNIH1_2166 | Transcriptional regulator, AraC family. | Urease accessory protein ureF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.556 |
ABI63066.1 | ureG | GbCGDNIH1_2168 | GbCGDNIH1_2167 | Transcriptional regulator, AraC family. | Urease accessory protein ureG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.569 |
ureA | ABI61090.1 | GbCGDNIH1_2162 | GbCGDNIH1_0192 | Urease gamma subunit; Belongs to the urease gamma subunit family. | Phosphinothricin N-acetyltransferase. | 0.487 |
ureA | ABI62642.1 | GbCGDNIH1_2162 | GbCGDNIH1_1744 | Urease gamma subunit; Belongs to the urease gamma subunit family. | Allophanate hydrolase. | 0.900 |
ureA | ABI62643.1 | GbCGDNIH1_2162 | GbCGDNIH1_1745 | Urease gamma subunit; Belongs to the urease gamma subunit family. | Urea carboxylase. | 0.906 |
ureA | ABI63066.1 | GbCGDNIH1_2162 | GbCGDNIH1_2168 | Urease gamma subunit; Belongs to the urease gamma subunit family. | Transcriptional regulator, AraC family. | 0.441 |
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