STRINGSTRING
KAOT1_00735 protein (Kordia algicida) - STRING interaction network
"KAOT1_00735" - Transcription elongation factor in Kordia algicida
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_00735Transcription elongation factor (139 aa)    
Predicted Functional Partners:
KAOT1_00730
Uncharacterized protein (48 aa)
              0.859
KAOT1_00740
Uncharacterized protein (141 aa)
              0.840
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1432 aa)
       
 
  0.721
KAOT1_00745
Uncharacterized protein (278 aa)
              0.712
rpoA
Transcriptase subunit alpha ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (330 aa)
     
 
  0.692
KAOT1_21272
Adenylate kinase (368 aa)
         
  0.673
KAOT1_00720
Histidine kinase (359 aa)
 
        0.634
rpoB
Transcriptase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1269 aa)
       
 
  0.565
KAOT1_13322
Deoxyguanosine kinase/deoxyadenosine kinase subunit (377 aa)
 
     
  0.552
murI
Glutamate racemase ; Provides the (R)-glutamate required for cell wall biosynthesis (259 aa)
     
 
  0.531
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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