STRINGSTRING
KAOT1_01205 protein (Kordia algicida) - STRING interaction network
"KAOT1_01205" - Tetratricopeptide TPR_2 in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_01205Tetratricopeptide TPR_2 (554 aa)    
Predicted Functional Partners:
KAOT1_18602
Uncharacterized protein (284 aa)
   
          0.711
KAOT1_04052
Uncharacterized protein (929 aa)
   
          0.693
KAOT1_06732
Uncharacterized protein (932 aa)
   
          0.593
KAOT1_15578
Outer membrane protein (526 aa)
   
          0.530
KAOT1_11562
Protease B (378 aa)
   
          0.523
KAOT1_18932
Uncharacterized protein (104 aa)
   
          0.494
KAOT1_11031
TonB-dependent receptor domain protein (814 aa)
   
          0.472
KAOT1_01200
Cell surface protein (1435 aa)
              0.466
KAOT1_15608
Alpha amylase, catalytic region (654 aa)
   
          0.456
KAOT1_18003
Uncharacterized protein (1112 aa)
   
          0.416
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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