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prfA protein (Kordia algicida) - STRING interaction network
"prfA" - Peptide chain release factor 1 in Kordia algicida
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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prfAPeptide chain release factor 1 ; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (357 aa)    
Predicted Functional Partners:
prmC
Protein-glutamine N-methyltransferase PrmC ; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif (289 aa)
 
  0.988
KAOT1_17163
Putative peptide chain release factor (198 aa)
   
  0.929
KAOT1_19307
Methyltransferase small (218 aa)
   
 
  0.926
frr
Ribosome-releasing factor ; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another (184 aa)
 
 
  0.879
lepA
Ribosomal back-translocase LepA ; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (598 aa)
 
   
  0.841
rplM
50S ribosomal protein L13 ; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (151 aa)
 
 
  0.829
KAOT1_02647
Peptide chain release factor 2 ; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (316 aa)
   
0.821
rplD
50S ribosomal protein L4 ; Forms part of the polypeptide exit tunnel (209 aa)
 
  0.789
rplQ
50S ribosomal protein L17 (157 aa)
 
 
  0.786
mnmE
tRNA modification GTPase MnmE ; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 (464 aa)
 
   
  0.778
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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