STRINGSTRING
KAOT1_01849 protein (Kordia algicida) - STRING interaction network
"KAOT1_01849" - Transglutaminase-like protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_01849Transglutaminase-like protein (210 aa)    
Predicted Functional Partners:
KAOT1_01854
Uncharacterized protein (431 aa)
              0.859
KAOT1_01844
Probable aminopeptidase fused to fibronectin type 3 domain (445 aa)
              0.859
KAOT1_01839
Uncharacterized protein (191 aa)
              0.859
KAOT1_08804
Uncharacterized protein (882 aa)
   
          0.704
KAOT1_06412
Uncharacterized protein (369 aa)
   
          0.628
KAOT1_11041
50S ribosomal protein L33 (808 aa)
   
          0.575
KAOT1_19492
Uncharacterized protein (291 aa)
   
          0.544
KAOT1_08684
Uncharacterized protein (210 aa)
   
          0.504
KAOT1_01859
Uncharacterized protein (161 aa)
              0.488
KAOT1_10871
Cell wall hydrolase/autolysin (198 aa)
   
          0.481
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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