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KAOT1_01959 protein (Kordia algicida) - STRING interaction network
"KAOT1_01959" - ABC transporter, ATP-binding protein in Kordia algicida
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
KAOT1_01959ABC transporter, ATP-binding protein (545 aa)    
Predicted Functional Partners:
rplA
50S ribosomal protein L1 ; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (230 aa)
     
      0.727
rplE
50S ribosomal protein L5 ; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (183 aa)
   
      0.725
KAOT1_01964
Uncharacterized protein (70 aa)
              0.636
KAOT1_01954
Uncharacterized protein (148 aa)
              0.633
rpsG
30S ribosomal protein S7 ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (158 aa)
   
      0.574
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (260 aa)
 
 
  0.545
KAOT1_19727
Bifunctional protein- malate dehydrogenase phosphotransacetylase (765 aa)
     
 
  0.535
KAOT1_10906
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (511 aa)
   
        0.529
KAOT1_15743
Phosphohexose isomerase (547 aa)
   
      0.528
KAOT1_09461
30S ribosomal protein S1 (591 aa)
 
        0.519
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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