STRINGSTRING
KAOT1_03677 protein (Kordia algicida) - STRING interaction network
"KAOT1_03677" - Uncharacterized protein in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_03677Uncharacterized protein (650 aa)    
Predicted Functional Partners:
KAOT1_03682
Ribosomal large subunit pseudouridine synthase D (224 aa)
   
        0.672
KAOT1_03672
Glutathione synthetase (195 aa)
              0.624
KAOT1_14827
Ribonuclease G (515 aa)
       
    0.578
hemE
Uroporphyrinogen decarboxylase ; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (340 aa)
         
  0.507
KAOT1_14262
4-hydroxybenzoate-octaprenyltransferase (304 aa)
       
  0.497
rpmE2
50S ribosomal protein L31 type B (313 aa)
       
  0.497
KAOT1_22051
Putative short-chain dehydrogenase/reductase (262 aa)
       
    0.470
KAOT1_11777
Short chain dehydrogenase (200 aa)
       
    0.470
KAOT1_09206
Short chain dehydrogenase possible 3-oxoacyl-[acyl-carrier-protein] reductase (227 aa)
       
    0.470
KAOT1_06497
Short-chain alcohol-related dehydrogenase (268 aa)
       
    0.470
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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