STRINGSTRING
KAOT1_04245 protein (Kordia algicida) - STRING interaction network
"KAOT1_04245" - Transcriptional regulator of the lacI family protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_04245Transcriptional regulator of the lacI family protein (178 aa)    
Predicted Functional Partners:
KAOT1_04235
D-xylose transporter (346 aa)
   
 
  0.929
KAOT1_04240
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase (222 aa)
 
   
  0.914
KAOT1_12442
Uncharacterized protein (302 aa)
 
 
  0.761
KAOT1_17053
Probable carbohydrate kinase, PfkB family protein (308 aa)
   
 
  0.691
KAOT1_04230
LacI family transcriptional regulator (340 aa)
 
       
0.648
KAOT1_19597
Cyanophycin synthetase (884 aa)
       
  0.586
KAOT1_08979
Phosphomannomutase (462 aa)
       
  0.555
KAOT1_08809
Phosphomannomutase (574 aa)
       
  0.555
KAOT1_16238
Alanine racemase ; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids (369 aa)
   
   
    0.545
KAOT1_18972
Ribose-phosphate diphosphokinase (Phosphoribosylpyrophosphate synthetase) (313 aa)
       
    0.544
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
Server load: low (7%) [HD]