STRINGSTRING
KAOT1_04425 protein (Kordia algicida) - STRING interaction network
"KAOT1_04425" - Uncharacterized protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_04425Uncharacterized protein (258 aa)    
Predicted Functional Partners:
KAOT1_04420
Uncharacterized protein (109 aa)
              0.783
KAOT1_04430
Uncharacterized protein (208 aa)
              0.651
KAOT1_22231
Aspartate aminotransferase (141 aa)
   
          0.584
KAOT1_12247
Uncharacterized protein (474 aa)
   
          0.567
KAOT1_16968
Auxin-regulated protein (499 aa)
   
          0.550
KAOT1_02837
Uncharacterized protein (305 aa)
   
          0.548
KAOT1_17943
Uncharacterized protein (196 aa)
   
          0.528
KAOT1_09451
RNA polymerase, sigma-E factor heat shock and oxidative stress (182 aa)
   
          0.518
KAOT1_16548
Transcriptional regulator (267 aa)
   
          0.512
KAOT1_14422
Uncharacterized protein (325 aa)
   
          0.492
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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