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KAOT1_04635 protein (Kordia algicida) - STRING interaction network
"KAOT1_04635" - Transcriptional regulator, AsnC/Lrp family protein in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_04635Transcriptional regulator, AsnC/Lrp family protein (153 aa)    
Predicted Functional Partners:
KAOT1_05377
Transcriptional regulator, AsnC family protein (159 aa)
   
          0.777
KAOT1_19317
Radical SAM domain protein (356 aa)
   
 
  0.694
KAOT1_13837
Uncharacterized protein (351 aa)
   
 
  0.694
KAOT1_10801
AstB/chuR/nirj-related protein (391 aa)
   
 
  0.694
KAOT1_04645
Abortive infection protein (210 aa)
              0.661
KAOT1_04640
Uncharacterized protein (287 aa)
              0.651
KAOT1_04630
Methionine gamma-lyase (404 aa)
              0.627
KAOT1_15928
Glutamate synthase (Ferredoxin) (1500 aa)
   
   
  0.509
KAOT1_02407
Ornithine carbamoyltransferase (311 aa)
       
  0.474
KAOT1_21482
DNA polymerase III, epsilon subunit (457 aa)
   
        0.447
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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