STRINGSTRING
KAOT1_04922 protein (Kordia algicida) - STRING interaction network
"KAOT1_04922" - Uncharacterized protein in Kordia algicida
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_04922Uncharacterized protein (198 aa)    
Predicted Functional Partners:
KAOT1_04917
Uncharacterized protein (162 aa)
              0.684
KAOT1_04927
Uncharacterized protein (59 aa)
              0.616
KAOT1_01445
Transcriptional regulator, TetR family protein (193 aa)
   
          0.568
KAOT1_12337
Putative secreted protein (569 aa)
   
          0.536
deoC
Phosphodeoxyriboaldolase ; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate (221 aa)
              0.532
KAOT1_04907
Purine-nucleoside phosphorylase (232 aa)
              0.532
KAOT1_04902
Phosphoglycerate mutase (175 aa)
              0.511
KAOT1_21776
Uncharacterized protein (819 aa)
   
          0.441
KAOT1_04897
Small protein B ; Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a "tag peptide", a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to tra [...] (152 aa)
 
          0.431
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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