STRINGSTRING
KAOT1_05012 protein (Kordia algicida) - STRING interaction network
"KAOT1_05012" - Uncharacterized protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_05012Uncharacterized protein (1083 aa)    
Predicted Functional Partners:
KAOT1_07283
Uncharacterized protein (1187 aa)
   
          0.628
KAOT1_12337
Putative secreted protein (569 aa)
   
          0.592
KAOT1_22021
Uncharacterized protein (239 aa)
   
          0.544
KAOT1_05017
Lipase, putative (288 aa)
              0.487
KAOT1_05007
Uncharacterized protein (298 aa)
              0.460
KAOT1_05002
Putative outer membrane protein (291 aa)
              0.454
KAOT1_13232
Uncharacterized protein (342 aa)
   
          0.448
KAOT1_06722
Putative outer membrane protein probably involved in nutrient binding (488 aa)
   
          0.447
KAOT1_09256
TPR repeat (427 aa)
   
          0.446
KAOT1_01554
Glyoxalase family protein (162 aa)
   
          0.432
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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