STRINGSTRING
KAOT1_05057 protein (Kordia algicida) - STRING interaction network
"KAOT1_05057" - Uncharacterized protein in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_05057Uncharacterized protein (334 aa)    
Predicted Functional Partners:
KAOT1_16858
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (386 aa)
   
  0.991
KAOT1_05102
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (372 aa)
 
  0.985
KAOT1_09351
DNA polymerase III subunit gamma/tau (587 aa)
   
  0.984
KAOT1_13252
DNA-directed DNA polymerase (1460 aa)
     
  0.974
KAOT1_19572
DNA polymerase I (943 aa)
   
 
  0.908
KAOT1_21482
DNA polymerase III, epsilon subunit (457 aa)
       
  0.877
KAOT1_06512
DNA polymerase III, epsilon subunit (454 aa)
       
  0.877
KAOT1_05052
Uncharacterized protein (148 aa)
 
          0.850
KAOT1_10996
Putative DNA polymerase III epsilon chain (257 aa)
       
  0.822
KAOT1_17093
Pyruvate kinase (476 aa)
       
    0.778
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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