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KAOT1_06052 protein (Kordia algicida) - STRING interaction network
"KAOT1_06052" - DNA topoisomerase IV subunit A in Kordia algicida
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_06052DNA topoisomerase IV subunit A (880 aa)    
Predicted Functional Partners:
KAOT1_06062
DNA topoisomerase (ATP-hydrolyzing) (618 aa)
  0.998
gyrB
DNA gyrase subunit B ; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (645 aa)
  0.983
KAOT1_05102
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (372 aa)
 
  0.870
KAOT1_06057
Uncharacterized protein (158 aa)
              0.861
KAOT1_20152
DNA topoisomerase IB (367 aa)
   
 
  0.820
KAOT1_19572
DNA polymerase I (943 aa)
 
 
  0.779
KAOT1_06102
Peptidyl-prolyl cis-trans isomerase (310 aa)
 
  0.752
metG
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (739 aa)
   
 
  0.744
KAOT1_05472
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (473 aa)
 
 
  0.738
KAOT1_18147
Ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (812 aa)
   
   
  0.734
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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