STRINGSTRING
KAOT1_06297 protein (Kordia algicida) - STRING interaction network
"KAOT1_06297" - Transport permease protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_06297Transport permease protein (289 aa)    
Predicted Functional Partners:
KAOT1_06292
ABC transporter related protein (442 aa)
 
  0.996
KAOT1_06277
Polysaccharide biosynthesis protein (400 aa)
   
   
  0.923
KAOT1_06287
Uncharacterized protein (215 aa)
              0.885
KAOT1_06282
Glycosyltransferase (285 aa)
 
          0.879
KAOT1_06302
Uncharacterized protein (128 aa)
              0.805
KAOT1_06272
Uncharacterized protein (63 aa)
              0.718
KAOT1_06312
Uncharacterized protein (371 aa)
              0.641
KAOT1_06307
Uncharacterized protein (49 aa)
              0.641
KAOT1_06267
N-acetylneuraminate synthase (334 aa)
              0.639
KAOT1_11642
Glycosyl transferase, group 1 (357 aa)
 
   
  0.633
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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