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KAOT1_07002 protein (Kordia algicida) - STRING interaction network
"KAOT1_07002" - Ribosomal protein S6 modification protein in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_07002Ribosomal protein S6 modification protein (273 aa)    
Predicted Functional Partners:
KAOT1_07007
Uncharacterized protein (121 aa)
              0.712
KAOT1_10941
Uncharacterized protein (446 aa)
   
          0.627
KAOT1_14037
S6 modification enzyme RimK (297 aa)
   
          0.608
KAOT1_08433
Uncharacterized protein (466 aa)
   
          0.556
KAOT1_06997
Metal-dependent hydrolases of the beta-lactamase superfamily III protein (316 aa)
              0.553
KAOT1_07032
Possible ribosomal protein S6 modification protein (459 aa)
   
          0.549
KAOT1_05772
tRNA pseudouridine synthase C (1276 aa)
   
          0.542
KAOT1_17248
Uncharacterized protein (169 aa)
   
          0.504
KAOT1_19877
Uncharacterized protein (392 aa)
   
          0.485
KAOT1_07017
Uncharacterized protein (156 aa)
              0.483
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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