STRINGSTRING
KAOT1_07057 protein (Kordia algicida) - STRING interaction network
"KAOT1_07057" - Phytoene dehydrogenase in Kordia algicida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_07057Phytoene dehydrogenase (494 aa)    
Predicted Functional Partners:
KAOT1_07062
Ribonuclease Z (279 aa)
 
  0.997
KAOT1_07067
Beta-carotene hydroxylase (121 aa)
 
     
  0.964
KAOT1_06867
Lycopene cyclase (381 aa)
 
   
  0.903
KAOT1_07052
Probable transcriptional regulator, MerR family protein (298 aa)
 
          0.831
KAOT1_22656
Isopentenyl-diphosphate delta-isomerase (174 aa)
 
     
  0.661
KAOT1_21562
Deoxyribodipyrimidine photolyase (Photoreactivation) (432 aa)
 
   
  0.584
KAOT1_19712
Cytochrome P450 hydroxylase (444 aa)
 
 
  0.582
KAOT1_09221
Deoxyribodipyrimidine photolyase-class I (433 aa)
 
   
  0.544
KAOT1_18277
Putative isoprenyl synthetase (324 aa)
   
   
  0.543
KAOT1_16208
Glycosyl transferase, family 2 (391 aa)
       
  0.531
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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