STRINGSTRING
KAOT1_07062 protein (Kordia algicida) - STRING interaction network
"KAOT1_07062" - Ribonuclease Z in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_07062Ribonuclease Z (279 aa)    
Predicted Functional Partners:
KAOT1_07057
Phytoene dehydrogenase (494 aa)
 
  0.997
KAOT1_07067
Beta-carotene hydroxylase (121 aa)
 
     
  0.970
KAOT1_07052
Probable transcriptional regulator, MerR family protein (298 aa)
 
          0.849
KAOT1_12612
Octaprenyl-diphosphate synthase (325 aa)
   
  0.810
KAOT1_22656
Isopentenyl-diphosphate delta-isomerase (174 aa)
 
   
  0.810
KAOT1_18277
Putative isoprenyl synthetase (324 aa)
   
  0.810
KAOT1_20232
Oxidoreductase, FAD-binding protein (423 aa)
 
 
  0.770
KAOT1_08148
NAD dependent epimerase/dehydratase family protein (272 aa)
   
 
  0.645
KAOT1_09176
Uncharacterized protein (473 aa)
 
 
    0.632
KAOT1_18852
Sterol desaturase (293 aa)
   
 
  0.605
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
Server load: low (8%) [HD]