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KAOT1_07993 protein (Kordia algicida) - STRING interaction network
"KAOT1_07993" - 30S ribosomal protein S6 in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_0799330S ribosomal protein S6 (286 aa)    
Predicted Functional Partners:
KAOT1_07988
Uncharacterized protein (315 aa)
              0.909
nadD
Nicotinate mononucleotide adenylyltransferase ; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (193 aa)
       
  0.832
KAOT1_10976
CinA-like protein (418 aa)
   
 
    0.817
surE
Nucleoside 5’-monophosphate phosphohydrolase ; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (259 aa)
   
 
    0.775
KAOT1_09881
Possible secreted 5’-nucleotidase (305 aa)
       
    0.771
KAOT1_16113
Uncharacterized protein (224 aa)
 
 
  0.751
KAOT1_17243
Uncharacterized protein (497 aa)
   
  0.740
KAOT1_07978
Uncharacterized protein (143 aa)
              0.701
KAOT1_07983
Uncharacterized protein (188 aa)
              0.667
rlmH
rRNA (pseudouridine-N3-)-methyltransferase RlmH ; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (157 aa)
              0.608
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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