STRINGSTRING
KAOT1_08639 protein (Kordia algicida) - STRING interaction network
"KAOT1_08639" - Possible sugar nucleotide epimerase in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_08639Possible sugar nucleotide epimerase (303 aa)    
Predicted Functional Partners:
KAOT1_07843
Bacterioferritin comigratory protein (153 aa)
   
        0.699
KAOT1_05947
Redoxin domain protein (211 aa)
   
        0.699
KAOT1_22011
Uncharacterized protein (144 aa)
   
        0.616
KAOT1_20432
Uncharacterized protein (272 aa)
   
        0.616
KAOT1_08644
Uncharacterized protein (225 aa)
              0.597
KAOT1_08649
Uncharacterized protein (166 aa)
              0.588
KAOT1_21562
Deoxyribodipyrimidine photolyase (Photoreactivation) (432 aa)
 
   
  0.576
KAOT1_09221
Deoxyribodipyrimidine photolyase-class I (433 aa)
 
   
  0.551
KAOT1_09216
Uncharacterized protein (164 aa)
 
            0.537
rpmI
50S ribosomal protein L35 (65 aa)
     
        0.508
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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