STRINGSTRING
KAOT1_08864 protein (Kordia algicida) - STRING interaction network
"KAOT1_08864" - Uncharacterized protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_08864Uncharacterized protein (1017 aa)    
Predicted Functional Partners:
KAOT1_08874
Uncharacterized protein (256 aa)
              0.834
KAOT1_07898
Uncharacterized protein (833 aa)
   
          0.770
KAOT1_09846
Uncharacterized protein (108 aa)
   
          0.755
KAOT1_22506
Uncharacterized protein (433 aa)
 
          0.730
KAOT1_18137
Uncharacterized protein (189 aa)
   
          0.730
KAOT1_22091
Uncharacterized protein (259 aa)
   
          0.713
KAOT1_02507
Possible TonB-dependent receptor (798 aa)
   
          0.711
KAOT1_10266
Uncharacterized protein (210 aa)
   
          0.707
KAOT1_09851
Lipoprotein protein, putative (264 aa)
   
          0.692
KAOT1_13427
Outer membrane protein, ompH family (339 aa)
   
          0.673
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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