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KAOT1_09039 protein (Kordia algicida) - STRING interaction network
"KAOT1_09039" - RNA polymerase, sigma-E factor heat shock and oxidative stress in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_09039RNA polymerase, sigma-E factor heat shock and oxidative stress (179 aa)    
Predicted Functional Partners:
KAOT1_09034
Uncharacterized protein (246 aa)
              0.869
KAOT1_09451
RNA polymerase, sigma-E factor heat shock and oxidative stress (182 aa)
   
          0.777
KAOT1_09069
Uncharacterized protein (931 aa)
 
          0.757
KAOT1_16548
Transcriptional regulator (267 aa)
   
          0.751
KAOT1_11722
Uncharacterized protein (1609 aa)
   
          0.751
KAOT1_20422
Uncharacterized protein (806 aa)
   
          0.743
KAOT1_21552
Uncharacterized protein (942 aa)
 
          0.732
KAOT1_04555
Uncharacterized protein (910 aa)
 
          0.721
KAOT1_15483
Uncharacterized protein (890 aa)
 
          0.717
KAOT1_15508
RNA polymerase specialized sigma subunit (185 aa)
   
          0.701
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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