STRINGSTRING
KAOT1_09246 protein (Kordia algicida) - STRING interaction network
"KAOT1_09246" - Uncharacterized protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_09246Uncharacterized protein (96 aa)    
Predicted Functional Partners:
KAOT1_09256
TPR repeat (427 aa)
 
          0.744
KAOT1_22291
Uncharacterized protein (130 aa)
   
          0.700
KAOT1_12217
Outer membrane protein (548 aa)
   
          0.694
KAOT1_09241
Uncharacterized protein (214 aa)
              0.687
KAOT1_05167
Uncharacterized protein (75 aa)
   
          0.677
KAOT1_09251
Cyanophycinase and related exopeptidase-like protein (433 aa)
              0.655
KAOT1_14637
Uncharacterized protein (275 aa)
   
          0.634
murA
UDP-N-acetylglucosamine enolpyruvyl transferase ; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (435 aa)
              0.627
KAOT1_06152
Uncharacterized protein (324 aa)
   
          0.597
KAOT1_02902
Uncharacterized protein (172 aa)
   
          0.591
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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