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KAOT1_09451 protein (Kordia algicida) - STRING interaction network
"KAOT1_09451" - RNA polymerase, sigma-E factor heat shock and oxidative stress in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_09451RNA polymerase, sigma-E factor heat shock and oxidative stress (182 aa)    
Predicted Functional Partners:
KAOT1_09456
Ribonuclease Z (908 aa)
 
          0.892
KAOT1_09039
RNA polymerase, sigma-E factor heat shock and oxidative stress (179 aa)
   
          0.777
KAOT1_16548
Transcriptional regulator (267 aa)
   
          0.753
KAOT1_15483
Uncharacterized protein (890 aa)
   
          0.690
KAOT1_20422
Uncharacterized protein (806 aa)
   
          0.675
KAOT1_04555
Uncharacterized protein (910 aa)
   
          0.675
KAOT1_05322
Uncharacterized protein (159 aa)
   
          0.672
KAOT1_13182
Uncharacterized protein (327 aa)
   
          0.637
KAOT1_02742
Uncharacterized protein (910 aa)
   
          0.636
KAOT1_11722
Uncharacterized protein (1609 aa)
   
          0.617
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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