STRINGSTRING
KAOT1_09456 protein (Kordia algicida) - STRING interaction network
"KAOT1_09456" - Ribonuclease Z in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_09456Ribonuclease Z (908 aa)    
Predicted Functional Partners:
KAOT1_09451
RNA polymerase, sigma-E factor heat shock and oxidative stress (182 aa)
 
          0.892
KAOT1_20127
Uncharacterized protein (1069 aa)
   
          0.758
KAOT1_19372
Uncharacterized protein (277 aa)
   
          0.701
KAOT1_14052
Uncharacterized protein (292 aa)
   
          0.696
KAOT1_15868
Uncharacterized protein (116 aa)
   
          0.692
KAOT1_12302
Uncharacterized protein (426 aa)
   
          0.641
KAOT1_03552
Molecular chaperone DnaK (216 aa)
   
          0.617
KAOT1_19312
Radical SAM domain protein (506 aa)
   
          0.593
KAOT1_19877
Uncharacterized protein (392 aa)
   
          0.550
KAOT1_03252
Uncharacterized protein (228 aa)
   
          0.533
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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