STRINGSTRING
cmk protein (Kordia algicida) - STRING interaction network
"cmk" - Cytidine monophosphate kinase in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmkCytidine monophosphate kinase (229 aa)    
Predicted Functional Partners:
pyrF
OMP decarboxylase (271 aa)
   
 
    0.985
ndk
Nucleoside-2-P kinase ; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (139 aa)
   
 
  0.980
KAOT1_18142
Ribonucleoside-diphosphate reductase 1, beta subunit (326 aa)
     
  0.979
KAOT1_18147
Ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (812 aa)
       
  0.978
KAOT1_06647
Uracil phosphoribosyltransferase (218 aa)
     
 
  0.978
KAOT1_09461
30S ribosomal protein S1 (591 aa)
 
 
  0.965
upp
Threonyl-tRNA synthetase (647 aa)
       
  0.949
aroA
5-enolpyruvylshikimate-3-phosphate synthase ; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate (409 aa)
   
 
  0.931
der
GTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (434 aa)
   
  0.897
panC
Pantoate-activating enzyme ; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (282 aa)
 
   
  0.889
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
Server load: low (10%) [HD]