STRINGSTRING
KAOT1_09586 protein (Kordia algicida) - STRING interaction network
"KAOT1_09586" - ISCps6, transposase in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_09586ISCps6, transposase (510 aa)    
Predicted Functional Partners:
KAOT1_09591
Uncharacterized protein (177 aa)
              0.557
KAOT1_19457
Uncharacterized protein (382 aa)
   
          0.511
KAOT1_03562
CHU large protein (793 aa)
   
          0.505
KAOT1_09581
Uncharacterized protein (336 aa)
              0.498
KAOT1_13732
Uncharacterized protein (353 aa)
   
          0.452
KAOT1_06417
Uncharacterized protein (147 aa)
   
          0.423
KAOT1_10991
Uncharacterized protein (313 aa)
   
          0.406
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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