STRINGSTRING
glgC protein (Kordia algicida) - STRING interaction network
"glgC" - Glucose-1-phosphate adenylyltransferase in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgCGlucose-1-phosphate adenylyltransferase (388 aa)    
Predicted Functional Partners:
KAOT1_14997
Possible glycogen synthase (245 aa)
     
 
    0.901
KAOT1_09646
Uncharacterized protein (322 aa)
              0.845
KAOT1_09641
Uncharacterized protein (181 aa)
              0.720
KAOT1_09636
Uncharacterized protein (197 aa)
              0.574
KAOT1_09656
Uncharacterized protein (257 aa)
              0.560
KAOT1_09661
Uncharacterized protein (158 aa)
              0.521
KAOT1_09676
Uncharacterized protein (194 aa)
              0.421
KAOT1_09671
Uncharacterized protein (342 aa)
              0.421
KAOT1_09666
Uncharacterized protein (260 aa)
              0.421
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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