STRINGSTRING
KAOT1_09696 protein (Kordia algicida) - STRING interaction network
"KAOT1_09696" - Beta-Ig-H3/fasciclin in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_09696Beta-Ig-H3/fasciclin (170 aa)    
Predicted Functional Partners:
KAOT1_09226
Beta-Ig-H3/fasciclin (320 aa)
       
0.885
KAOT1_09691
RNA polymerase sigma factor (184 aa)
 
          0.801
KAOT1_09686
Uncharacterized protein (268 aa)
 
          0.694
KAOT1_03057
RNA polymerase, sigma-E factor heat shock and oxidative stress (176 aa)
 
          0.533
KAOT1_20582
Uncharacterized protein (317 aa)
   
          0.472
KAOT1_16513
Sodium/hydrogen exchanger (616 aa)
     
 
    0.438
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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