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KAOT1_10351 protein (Kordia algicida) - STRING interaction network
"KAOT1_10351" - Putative pre-16S rRNA nuclease in Kordia algicida
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
KAOT1_10351Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (135 aa)    
Predicted Functional Partners:
KAOT1_10356
Polypeptide deformylase ; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (196 aa)
              0.883
KAOT1_10361
Uncharacterized protein (137 aa)
              0.665
pyrE
Orotate phosphoribosyltransferase ; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (214 aa)
       
    0.556
KAOT1_10391
Shikimate 5-dehydrogenase (253 aa)
 
      0.554
KAOT1_17333
Single-strand DNA specific exonuclease (562 aa)
 
      0.546
KAOT1_10336
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (316 aa)
              0.531
KAOT1_01994
Putative transcriptional regulator (189 aa)
   
   
  0.518
KAOT1_10691
Uncharacterized protein ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (1015 aa)
 
          0.514
alaS
Alanyl-tRNA synthetase ; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (870 aa)
 
        0.512
KAOT1_05057
Uncharacterized protein (334 aa)
   
      0.470
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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