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KAOT1_11126 protein (Kordia algicida) - STRING interaction network
"KAOT1_11126" - Putative ATP-dependent RNA helicase in Kordia algicida
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_11126Putative ATP-dependent RNA helicase (411 aa)    
Predicted Functional Partners:
KAOT1_06102
Peptidyl-prolyl cis-trans isomerase (310 aa)
 
  0.848
KAOT1_10106
Peptidyl-prolyl cis-trans isomerase (405 aa)
 
  0.847
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (746 aa)
   
 
  0.809
KAOT1_18212
Cold shock protein, DNA-binding (64 aa)
   
  0.805
KAOT1_11767
Cold shock protein (63 aa)
   
  0.805
KAOT1_05882
Cold shock protein (69 aa)
   
  0.805
KAOT1_21497
Possible ATP-dependent RNA helicase (450 aa)
   
   
 
0.803
rplA
50S ribosomal protein L1 ; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (230 aa)
   
  0.766
eno
2-phosphoglycerate dehydratase ; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (429 aa)
   
 
  0.762
rplD
50S ribosomal protein L4 ; Forms part of the polypeptide exit tunnel (209 aa)
     
  0.760
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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