STRINGSTRING
KAOT1_11652 protein (Kordia algicida) - STRING interaction network
"KAOT1_11652" - Uncharacterized protein in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_11652Uncharacterized protein (316 aa)    
Predicted Functional Partners:
KAOT1_11657
Uncharacterized protein (198 aa)
              0.859
KAOT1_11662
Probable glycosyltransferase (302 aa)
              0.650
KAOT1_11667
Uncharacterized protein (186 aa)
              0.646
cas9
CRISPR-associated endonuclease Cas9 ; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this pro [...] (1391 aa)
   
          0.592
KAOT1_21986
Peptidase S8 and S53, subtilisin, kexin, sedolisin (504 aa)
   
          0.567
KAOT1_06492
Uncharacterized protein (177 aa)
   
          0.516
KAOT1_06457
Uncharacterized protein (472 aa)
   
          0.502
KAOT1_13597
Uncharacterized protein (182 aa)
   
          0.490
KAOT1_21142
Uncharacterized protein (506 aa)
   
          0.402
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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