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KAOT1_11677 protein (Kordia algicida) - STRING interaction network
"KAOT1_11677" - tRNA nucleotidyltransferase in Kordia algicida
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
KAOT1_11677tRNA nucleotidyltransferase (474 aa)    
Predicted Functional Partners:
rnpA
Protein C5 ; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (131 aa)
   
   
    0.980
rnz
tRNase Z ; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (302 aa)
   
 
  0.972
KAOT1_05352
Probable ribonuclease (296 aa)
         
    0.944
KAOT1_11682
Cytochrome oxidase assembly protein (344 aa)
              0.867
KAOT1_11687
Uncharacterized protein (170 aa)
              0.822
KAOT1_14827
Ribonuclease G (515 aa)
   
  0.782
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (746 aa)
     
  0.782
KAOT1_08884
Uncharacterized protein (618 aa)
     
 
    0.777
KAOT1_06422
Extracellular ribonuclease/nuclease fusion protein (704 aa)
     
 
    0.777
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (731 aa)
   
  0.768
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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