STRINGSTRING
KAOT1_12237 protein (Kordia algicida) - STRING interaction network
"KAOT1_12237" - Uncharacterized protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_12237Uncharacterized protein (547 aa)    
Predicted Functional Partners:
KAOT1_06667
Uncharacterized protein (533 aa)
   
          0.685
KAOT1_12232
Uncharacterized protein (301 aa)
              0.545
KAOT1_12227
Uncharacterized protein (561 aa)
              0.534
KAOT1_07283
Uncharacterized protein (1187 aa)
   
          0.529
KAOT1_12767
Prephenate dehydrogenase (1843 aa)
   
          0.526
KAOT1_12222
Putative outer membrane protein, probably involved in nutrient binding (1079 aa)
              0.521
KAOT1_06692
Uncharacterized protein (416 aa)
   
          0.517
KAOT1_13477
Natural resistance-associated macrophage protein (424 aa)
   
          0.488
KAOT1_21766
LigB lipoprotein (439 aa)
   
          0.462
KAOT1_06712
Uncharacterized protein (1058 aa)
   
          0.462
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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