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KAOT1_12242 protein (Kordia algicida) - STRING interaction network
"KAOT1_12242" - Putative outer membrane protein, probably involved in nutrient binding in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_12242Putative outer membrane protein, probably involved in nutrient binding (1038 aa)    
Predicted Functional Partners:
KAOT1_12247
Uncharacterized protein (474 aa)
 
     
  0.968
KAOT1_12252
Uncharacterized protein (278 aa)
              0.779
KAOT1_07898
Uncharacterized protein (833 aa)
   
          0.763
KAOT1_12257
Uncharacterized protein (281 aa)
              0.757
KAOT1_13652
Putative outer membrane protein (437 aa)
   
          0.749
KAOT1_03432
Possible TonB-dependent receptor (806 aa)
   
          0.732
KAOT1_18137
Uncharacterized protein (189 aa)
   
          0.716
KAOT1_15578
Outer membrane protein (526 aa)
 
          0.687
KAOT1_18857
OmpA-related protein (1043 aa)
   
          0.671
KAOT1_18467
Uncharacterized protein (191 aa)
   
          0.660
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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