STRINGSTRING
KAOT1_13237 protein (Kordia algicida) - STRING interaction network
"KAOT1_13237" - Putative outer membrane protein, probably involved in nutrient binding in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_13237Putative outer membrane protein, probably involved in nutrient binding (132 aa)    
Predicted Functional Partners:
KAOT1_13232
Uncharacterized protein (342 aa)
 
          0.878
KAOT1_21297
Putative outer membrane protein, probably involved in nutrient binding (211 aa)
   
          0.721
KAOT1_05007
Uncharacterized protein (298 aa)
   
          0.694
KAOT1_04052
Uncharacterized protein (929 aa)
   
          0.677
KAOT1_04200
Putative outer membrane protein, probably involved in nutrient binding (474 aa)
   
          0.635
KAOT1_02837
Uncharacterized protein (305 aa)
   
          0.629
KAOT1_22436
Indole-3-glycerol phosphate synthase (88 aa)
   
          0.617
KAOT1_02427
Uncharacterized protein (205 aa)
   
          0.604
KAOT1_06552
Uncharacterized protein (320 aa)
   
          0.601
KAOT1_06732
Uncharacterized protein (932 aa)
   
          0.595
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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