STRINGSTRING
KAOT1_14772 protein (Kordia algicida) - STRING interaction network
"KAOT1_14772" - Uncharacterized protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_14772Uncharacterized protein (149 aa)    
Predicted Functional Partners:
rplU
50S ribosomal protein L21 ; This protein binds to 23S rRNA in the presence of protein L20 (215 aa)
              0.640
KAOT1_14777
Probable peptidase (442 aa)
              0.605
rpmA
50S ribosomal protein L27 (86 aa)
              0.545
KAOT1_14782
Peptidase M16-like protein (695 aa)
              0.521
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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