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KAOT1_14827 protein (Kordia algicida) - STRING interaction network
"KAOT1_14827" - Ribonuclease G in Kordia algicida
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
KAOT1_14827Ribonuclease G (515 aa)    
Predicted Functional Partners:
eno
2-phosphoglycerate dehydratase ; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (429 aa)
     
 
  0.902
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (746 aa)
   
  0.887
KAOT1_11677
tRNA nucleotidyltransferase (474 aa)
   
  0.782
rnz
tRNase Z ; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (302 aa)
   
 
  0.710
KAOT1_20787
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (198 aa)
     
  0.706
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (731 aa)
     
  0.691
KAOT1_14822
DNA-binding protein HU (96 aa)
         
  0.653
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (668 aa)
 
          0.617
rnc
Ribonuclease III ; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (244 aa)
   
 
  0.588
KAOT1_10996
Putative DNA polymerase III epsilon chain (257 aa)
 
 
    0.587
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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