Automated, unsupervised textmining - searching for proteins that are frequently mentioned together.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein (70 aa)
Predicted Functional Partners:
Uncharacterized protein (153 aa)
Membrane protein-like protein (167 aa)
Uncharacterized protein (177 aa)
Putative methylase/helicase (1224 aa)
DNA topoisomerase IB (367 aa)
Tetratricopeptide TPR_4 (286 aa)
ATP dependent DNA ligase (529 aa)
Ribonuclease G (515 aa)
Uncharacterized protein (439 aa)
Delta-aminolevulinic acid dehydratase (143 aa)
Your Current Organism:
NCBI taxonomy Id: 391587 Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1