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KAOT1_15037 protein (Kordia algicida) - STRING interaction network
"KAOT1_15037" - Exodeoxyribonuclease III in Kordia algicida
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_15037Exodeoxyribonuclease III (253 aa)    
Predicted Functional Partners:
nth
DNA-(apurinic or apyrimidinic site) lyase ; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (222 aa)
 
 
  0.970
KAOT1_05102
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (372 aa)
     
  0.846
KAOT1_19572
DNA polymerase I (943 aa)
     
  0.834
KAOT1_14817
A/G-specific adenine glycosylase (345 aa)
     
  0.823
hisB
Histidine biosynthesis bifunctional protein HisB (377 aa)
   
 
  0.707
ung
Uracil-DNA glycosylase ; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (221 aa)
     
  0.691
KAOT1_15032
Aldo/keto reductase (344 aa)
   
        0.634
KAOT1_11512
ATP dependent DNA ligase (529 aa)
   
 
  0.630
KAOT1_16858
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (386 aa)
     
    0.573
KAOT1_21482
DNA polymerase III, epsilon subunit (457 aa)
   
 
  0.554
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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