STRINGSTRING
leuD protein (Kordia algicida) - STRING interaction network
"leuD" - Isopropylmalate isomerase in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
leuDIsopropylmalate isomerase ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (194 aa)    
Predicted Functional Partners:
leuC
Isopropylmalate isomerase ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (463 aa)
  0.999
leuB
Beta-IPM dehydrogenase ; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (371 aa)
 
  0.999
KAOT1_15167
2-isopropylmalate synthase (390 aa)
 
 
  0.999
KAOT1_11897
Isocitrate dehydrogenase (503 aa)
 
  0.954
KAOT1_15903
Acetolactate synthase (577 aa)
 
 
  0.940
ilvD
Dihydroxy-acid dehydratase (559 aa)
 
 
  0.904
KAOT1_15928
Glutamate synthase (Ferredoxin) (1500 aa)
   
 
  0.822
KAOT1_19727
Bifunctional protein- malate dehydrogenase phosphotransacetylase (765 aa)
   
 
  0.804
KAOT1_20607
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit (690 aa)
     
 
    0.796
KAOT1_09781
Transketolase (803 aa)
     
 
    0.796
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
Server load: low (6%) [HD]