STRINGSTRING
recO protein (Kordia algicida) - STRING interaction network
"recO" - Recombination protein O in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recORecombination protein O ; Involved in DNA repair and RecF pathway recombination (239 aa)    
Predicted Functional Partners:
KAOT1_15828
Uncharacterized protein (806 aa)
 
          0.901
KAOT1_15838
Isoleucyl-tRNA synthetase (768 aa)
              0.885
KAOT1_02822
N-acetyl-gamma-glutamyl-phosphate reductase (1498 aa)
   
          0.760
KAOT1_13902
Uncharacterized protein (539 aa)
   
          0.752
KAOT1_07898
Uncharacterized protein (833 aa)
   
          0.748
KAOT1_10361
Uncharacterized protein (137 aa)
   
          0.746
KAOT1_19932
Uncharacterized protein (167 aa)
   
          0.738
KAOT1_14717
Siderophore (Surfactin) biosynthesis regulatory protein (212 aa)
   
          0.736
KAOT1_14867
Regulatory protein RecX ; Modulates RecA activity (156 aa)
 
          0.722
KAOT1_05052
Uncharacterized protein (148 aa)
   
          0.722
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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