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KAOT1_16038 protein (Kordia algicida) - STRING interaction network
"KAOT1_16038" - BatE, TRP domain containing protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_16038BatE, TRP domain containing protein (253 aa)    
Predicted Functional Partners:
KAOT1_16043
Aerotolerance-related exported protein (589 aa)
          0.990
KAOT1_16068
Uncharacterized protein (564 aa)
 
          0.927
KAOT1_16053
Aerotolerance-related membrane protein (344 aa)
 
     
  0.920
KAOT1_16073
Uncharacterized protein (288 aa)
 
          0.903
KAOT1_16048
Aerotolerance-related exported protein (284 aa)
 
          0.893
KAOT1_16063
BatA (Bacteroides aerotolerance operon) (335 aa)
 
          0.867
KAOT1_16033
Uncharacterized protein (44 aa)
              0.679
KAOT1_02822
N-acetyl-gamma-glutamyl-phosphate reductase (1498 aa)
   
          0.648
KAOT1_13902
Uncharacterized protein (539 aa)
   
          0.643
KAOT1_08558
Uncharacterized protein (225 aa)
   
          0.627
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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