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rpmF protein (Kordia algicida) - STRING interaction network
"rpmF" - 50S ribosomal protein L32 in Kordia algicida
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
rpmF50S ribosomal protein L32 (66 aa)    
Predicted Functional Partners:
KAOT1_16463
Riboflavin synthase subunit alpha (178 aa)
              0.879
pdxA
4-(phosphohydroxy)-L-threonine dehydrogenase ; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) (348 aa)
              0.747
KAOT1_16473
Beta-ketoacyl-ACP synthase III ; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and/or straight-chain of fatty acids (330 aa)
              0.691
KAOT1_16478
Biotin carboxyl carrier protein of acetyl-CoA carboxylase (163 aa)
              0.655
KAOT1_16483
Biotin carboxylase, subunit of acetyl CoA carboxylase (446 aa)
              0.585
KAOT1_16453
Riboflavin synthase, alpha subunit (198 aa)
              0.514
KAOT1_16998
Predicted acetyltransferase (169 aa)
   
          0.439
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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