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KAOT1_16503 protein (Kordia algicida) - STRING interaction network
"KAOT1_16503" - Possible TonB-dependent receptor in Kordia algicida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_16503Possible TonB-dependent receptor (800 aa)    
Predicted Functional Partners:
KAOT1_11722
Uncharacterized protein (1609 aa)
   
          0.724
KAOT1_05982
Transcriptional regulator, AraC family protein (309 aa)
   
          0.688
KAOT1_16508
tRNA-dihydrouridine synthase ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (330 aa)
              0.678
KAOT1_09039
RNA polymerase, sigma-E factor heat shock and oxidative stress (179 aa)
   
          0.673
KAOT1_22371
Uncharacterized protein (225 aa)
   
          0.653
KAOT1_06907
Uncharacterized protein (194 aa)
   
          0.645
KAOT1_12242
Putative outer membrane protein, probably involved in nutrient binding (1038 aa)
   
          0.636
KAOT1_15933
Uncharacterized protein (328 aa)
   
          0.618
lepA
Ribosomal back-translocase LepA ; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (598 aa)
              0.614
KAOT1_09496
Uncharacterized protein (363 aa)
   
          0.608
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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