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rnpA protein (Kordia algicida) - STRING interaction network
"rnpA" - Protein C5 in Kordia algicida
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rnpAProtein C5 ; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (131 aa)    
Predicted Functional Partners:
KAOT1_11677
tRNA nucleotidyltransferase (474 aa)
   
   
    0.980
rnz
tRNase Z ; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (302 aa)
         
    0.976
KAOT1_05352
Probable ribonuclease (296 aa)
         
    0.944
KAOT1_14382
Uroporphyrinogen-III synthase (248 aa)
 
          0.814
KAOT1_16588
C-terminal processing peptidase, tail-specific protease (545 aa)
              0.799
KAOT1_10361
Uncharacterized protein (137 aa)
   
          0.668
KAOT1_07783
Ribonuclease H-related protein (212 aa)
   
   
    0.667
KAOT1_16578
Uncharacterized protein (138 aa)
              0.650
KAOT1_01190
Putative phosphoribosylformylglycinamidine cyclo-ligase (439 aa)
   
          0.556
KAOT1_18137
Uncharacterized protein (189 aa)
   
          0.548
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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