STRINGSTRING
KAOT1_16793 protein (Kordia algicida) - STRING interaction network
"KAOT1_16793" - Outer membrane chaperone Skp in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_16793Outer membrane chaperone Skp (OmpH) (174 aa)    
Predicted Functional Partners:
KAOT1_20977
Uncharacterized protein (130 aa)
   
          0.755
KAOT1_07818
Uncharacterized protein (173 aa)
   
          0.750
KAOT1_07908
Uncharacterized protein (327 aa)
   
          0.745
KAOT1_08463
Putative aminodeoxychorismate lyase (189 aa)
   
          0.733
KAOT1_05317
Uncharacterized protein (174 aa)
   
          0.721
KAOT1_00790
Probable integral outer membrane protein (587 aa)
   
          0.713
KAOT1_14402
Uncharacterized protein (149 aa)
   
          0.705
KAOT1_09416
Uncharacterized protein (110 aa)
   
          0.699
KAOT1_02822
N-acetyl-gamma-glutamyl-phosphate reductase (1498 aa)
   
          0.677
KAOT1_21667
Uncharacterized protein (846 aa)
   
          0.666
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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