STRINGSTRING
KAOT1_17033 protein (Kordia algicida) - STRING interaction network
"KAOT1_17033" - DNA helicase in Kordia algicida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_17033DNA helicase (1084 aa)    
Predicted Functional Partners:
KAOT1_10041
ATP-dependent exoDNAse (Exonuclease V), alpha subunit-helicase superfamily I member (475 aa)
 
  0.968
KAOT1_16518
DNA repair and recombination protein, putative helicase (805 aa)
   
  0.946
KAOT1_17018
Uncharacterized protein (921 aa)
 
     
  0.898
KAOT1_17038
Uncharacterized protein (104 aa)
              0.859
KAOT1_09241
Uncharacterized protein (214 aa)
   
          0.746
kbl
Glycine acetyltransferase ; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA (397 aa)
              0.718
KAOT1_14382
Uroporphyrinogen-III synthase (248 aa)
   
          0.694
KAOT1_01654
Uncharacterized protein (267 aa)
   
          0.637
KAOT1_22091
Uncharacterized protein (259 aa)
   
          0.624
KAOT1_12522
Uncharacterized protein (105 aa)
   
          0.584
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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