STRINGSTRING
dut protein (Kordia algicida) - STRING interaction network
"dut" - Deoxyuridine 5'-triphosphate nucleotidohydrolase in Kordia algicida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dutDeoxyuridine 5’-triphosphate nucleotidohydrolase (232 aa)    
Predicted Functional Partners:
KAOT1_17758
Succinyl-CoA transferase, beta subunit (218 aa)
  0.999
ndk
Nucleoside-2-P kinase ; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (139 aa)
       
    0.918
thyA
Thymidylate synthase ; Provides the sole de novo source of dTMP for DNA biosynthesis (274 aa)
         
    0.900
KAOT1_01904
4-enzyme protein- 3-hydroxyacyl-CoA dehydrogenase 3-hydroxybutyryl-CoA epimerase (801 aa)
   
  0.899
KAOT1_02266
Acetyl-CoA acetyltransferase (392 aa)
   
 
  0.879
KAOT1_07558
Hydroxymethylglutaryl-CoA lyase like protein (274 aa)
   
 
    0.828
KAOT1_20527
3-hydroxybutyryl-CoA dehydrogenase (398 aa)
 
 
    0.800
KAOT1_04812
3-hydroxybutyryl-CoA dehydrogenase (295 aa)
 
 
    0.800
KAOT1_17743
Candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase (784 aa)
              0.753
KAOT1_20542
Enoyl-CoA hydratase (403 aa)
   
 
  0.721
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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